Search | VHL Search Portal

1.

Mitochondrial One-Carbon Pathway Supports Cytosolic Folate Integrity in Cancer Cells.

Zheng, Yuxiang; Lin, Ting-Yu; Lee, Gina; Paddock, Marcia N; Momb, Jessica; Cheng, Zhe; Li, Qian; Fei, Dennis L; Stein, Benjamin D; Ramsamooj, Shivan; Zhang, Guoan; Blenis, John; Cantley, Lewis C.

Cell ; 175(6): 1546-1560.e17, 2018 11 29.

Article in English | MEDLINE | ID: mdl-30500537

2.

Comparison of CRISPR Genomic Tagging for Affinity Purification and Endogenous Immunoprecipitation Coupled with Quantitative Mass Spectrometry To Identify the Dynamic AMPKα2 Interactome.

Stein, Benjamin D; Herzig, Sébastien; Martínez-Bartolomé, Salvador; Lavallée-Adam, Mathieu; Shaw, Reuben J; Yates, John R.

J Proteome Res ; 18(10): 3703-3714, 2019 10 04.

Article in English | MEDLINE | ID: mdl-31398040

3.

Huang et al. reply.

Huang, Jun X; Wu, David; Stein, Benjamin D; Moellering, Raymond E.

Nat Methods ; 18(7): 763-767, 2021 07.

Article in English | MEDLINE | ID: mdl-34140701

4.

Digestion and depletion of abundant proteins improves proteomic coverage.

Fonslow, Bryan R; Stein, Benjamin D; Webb, Kristofor J; Xu, Tao; Choi, Jeong; Park, Sung Kyu; Yates, John R.

Nat Methods ; 10(1): 54-6, 2013 Jan.

Article in English | MEDLINE | ID: mdl-23160281

5.

Mass spectrometry accelerates membrane protein analysis.

Savas, Jeffrey N; Stein, Benjamin D; Wu, Christine C; Yates, John R.

Trends Biochem Sci ; 36(7): 388-96, 2011 Jul.

Article in English | MEDLINE | ID: mdl-21616670

6.

Pulsed Azidohomoalanine Labeling in Mammals (PALM) Detects Changes in Liver-Specific LKB1 Knockout Mice.

McClatchy, Daniel B; Ma, Yuanhui; Liu, Chao; Stein, Benjamin D; Martínez-Bartolomé, Salvador; Vasquez, Debbie; Hellberg, Kristina; Shaw, Reuben J; Yates, John R.

J Proteome Res ; 14(11): 4815-22, 2015 Nov 06.

Article in English | MEDLINE | ID: mdl-26445171

7.

Lineage-specific intolerance to oncogenic drivers restricts histological transformation.

Gardner, Eric E; Earlie, Ethan M; Li, Kate; Thomas, Jerin; Hubisz, Melissa J; Stein, Benjamin D; Zhang, Chen; Cantley, Lewis C; Laughney, Ashley M; Varmus, Harold.

Science ; 383(6683): eadj1415, 2024 Feb 09.

Article in English | MEDLINE | ID: mdl-38330136

8.

Submitochondrial Protein Translocation Upon Stress Inhibits Thermogenic Energy Expenditure.

Haczeyni, Fahrettin; Steensels, Sandra; Stein, Benjamin D; Jordan, James M; Li, Le; Dartigue, Vincent; Sarklioglu, Selenay S; Qiao, Jixuan; Zhou, Xi K; Dannenberg, Andrew J; Iyengar, Neil M; Yu, Haiyuan; Cantley, Lewis C; Ersoy, Baran A.

bioRxiv ; 2023 May 04.

Article in English | MEDLINE | ID: mdl-37205525

9.

LKB1-Dependent Regulation of TPI1 Creates a Divergent Metabolic Liability between Human and Mouse Lung Adenocarcinoma.

Stein, Benjamin D; Ferrarone, John R; Gardner, Eric E; Chang, Jae Won; Wu, David; Hollstein, Pablo E; Liang, Roger J; Yuan, Min; Chen, Qiuying; Coukos, John S; Sindelar, Miriam; Ngo, Bryan; Gross, Steven S; Shaw, Reuben J; Zhang, Chen; Asara, John M; Moellering, Raymond E; Varmus, Harold; Cantley, Lewis C.

Cancer Discov ; 13(4): 1002-1025, 2023 04 03.

Article in English | MEDLINE | ID: mdl-36715544

10.

Addendum: Digestion and depletion of abundant proteins improves proteomic coverage.

Fonslow, Bryan R; Stein, Benjamin D; Webb, Kristofor J; Xu, Tao; Choi, Jeong; Park, Sung Kyu; Yates, John R.

Nat Methods ; 11(3): 347-8, 2014 Mar.

Article in English | MEDLINE | ID: mdl-24724171

11.

Limited Environmental Serine and Glycine Confer Brain Metastasis Sensitivity to PHGDH Inhibition.

Ngo, Bryan; Kim, Eugenie; Osorio-Vasquez, Victoria; Doll, Sophia; Bustraan, Sophia; Liang, Roger J; Luengo, Alba; Davidson, Shawn M; Ali, Ahmed; Ferraro, Gino B; Fischer, Grant M; Eskandari, Roozbeh; Kang, Diane S; Ni, Jing; Plasger, Ariana; Rajasekhar, Vinagolu K; Kastenhuber, Edward R; Bacha, Sarah; Sriram, Roshan K; Stein, Benjamin D; Bakhoum, Samuel F; Snuderl, Matija; Cotzia, Paolo; Healey, John H; Mainolfi, Nello; Suri, Vipin; Friedman, Adam; Manfredi, Mark; Sabatini, David M; Jones, Drew R; Yu, Min; Zhao, Jean J; Jain, Rakesh K; Keshari, Kayvan R; Davies, Michael A; Vander Heiden, Matthew G; Hernando, Eva; Mann, Matthias; Cantley, Lewis C; Pacold, Michael E.

Cancer Discov ; 10(9): 1352-1373, 2020 09.

Article in English | MEDLINE | ID: mdl-32571778

12.

Quantitative In Vivo Proteomics of Metformin Response in Liver Reveals AMPK-Dependent and -Independent Signaling Networks.

Stein, Benjamin D; Calzolari, Diego; Hellberg, Kristina; Hu, Ying S; He, Lin; Hung, Chien-Min; Toyama, Erin Q; Ross, Debbie S; Lillemeier, Björn F; Cantley, Lewis C; Yates, John R; Shaw, Reuben J.

Cell Rep ; 29(10): 3331-3348.e7, 2019 12 03.

Article in English | MEDLINE | ID: mdl-31801093

13.

1,3,8-Triazaspiro[4.5]decane-2,4-diones as efficacious pan-inhibitors of hypoxia-inducible factor prolyl hydroxylase 1-3 (HIF PHD1-3) for the treatment of anemia.

Vachal, Petr; Miao, Shouwu; Pierce, Joan M; Guiadeen, Deodial; Colandrea, Vincent J; Wyvratt, Matthew J; Salowe, Scott P; Sonatore, Lisa M; Milligan, James A; Hajdu, Richard; Gollapudi, Anantha; Keohane, Carol A; Lingham, Russell B; Mandala, Suzanne M; DeMartino, Julie A; Tong, Xinchun; Wolff, Michael; Steinhuebel, Dietrich; Kieczykowski, Gerard R; Fleitz, Fred J; Chapman, Kevin; Athanasopoulos, John; Adam, Gregory; Akyuz, Can D; Jena, Dhirendra K; Lusen, Jeffrey W; Meng, Juncai; Stein, Benjamin D; Xia, Lei; Sherer, Edward C; Hale, Jeffrey J.

J Med Chem ; 55(7): 2945-59, 2012 Apr 12.

Article in English | MEDLINE | ID: mdl-22364528

14.

Application of affinity selection/mass spectrometry to determine the structural isomer of parnafungins responsible for binding polyadenosine polymerase.

Adam, Gregory C; Parish, Craig A; Wisniewski, Douglas; Meng, Juncai; Liu, Min; Calati, Kathleen; Stein, Benjamin D; Athanasopoulos, John; Liberator, Paul; Roemer, Terry; Harris, Guy; Chapman, Kevin T.

J Am Chem Soc ; 130(49): 16704-10, 2008 Dec 10.

Article in English | MEDLINE | ID: mdl-19049464

VHL Search Portal

Information and Knowledge for Health

Config filters

Your selection (0)

Export format:

Export: